You can develop comprehensive analytical skills, covering both core theory and hands-on practice, based on an understanding of TCGA and CPTAC cancer genomics data. This includes the entire workflow, from downloading data using the GDC Portal to performing differential expression and survival analysis with R packages.
Cell Line Genomics Data Analysis Workshop
The DepMap (Cancer Dependency Map) is a cancer research platform that provides genomic data from over 1,000 cancer cell lines. In this workshop, you'll learn every step you need to apply this data directly to your research, from using the DepMap portal to data analysis, visualization, and interpretation of the results.
Multi-tissue Genomics Data Analysis Workshop
GTEx is an essential resource for disease mechanism research, detailing the relationship between genetic variants and tissue-specific gene expression. Through this hands-on workshop, you'll learn everything from how to use the GTEx Portal to analyzing tissue-specific gene expression and interpreting eQTL data.